11. Effects of bowel cleansing on the composition of the gut microbiota in inflammatory bowel disease patients and healthy controls.

Bacsur P, Rutka M, Asbóth A, Resál T, Szántó K, Jójárt B, Bálint A, Ari E, Ajibola W, Kintses B, Fehér T, Pigniczki D, Bor R, Fábián A, Maléth J, Szepes Z, Farkas K, Molnár T.
Journal/Proc./Book: Therapeutic Advances in Gastroenterology
Year: 2023
Thematic Pillar: Immuno Inflammatory Diseases

10. Characterization of antibiotic resistomes by reprogrammed bacteriophage-enabled functional metagenomics in clinical strains.

Apjok G, Számel M, Christodoulou C, Seregi V, Vásárhelyi BM, Stirling T, Eszenyi B, Sári T, Vidovics F, Nagrand E, Kovács D, Szili P, Lantos II, Méhi O, Jangir PK, Herczeg R, Gálik B, Urbán P, Gyenesei A, Draskovits G, Nyerges Á, Fekete G, Bodai L, Zsindely N, Dénes B, Yosef I, Qimron U, Papp B, Pál C, Kintses B.
Journal/Proc./Book: Nature Microbiology
Year:  2023
Thematic Pillar: Immuno Inflammatory Diseases, Metabolic and Cardiovascular Diseases

9. Plasticity and stereotypic rewiring of the transcriptome upon bacterial evolution of antibiotic resistance.

Grézal G, Spohn R, Méhi O, Dunai A, Lázár V, Bálint B, Nagy I, Pál C, Papp B.

Journal/Proc./Book: Molecular Biology and Evolution
Year:  2023
Thematic Pillar: Immuno Inflammatory Diseases, Metabolic and Cardiovascular Diseases

8. A single early introduction governed viral diversity in the second wave of SARS-CoV-2 epidemic in Hungary.

Ari E, Vásárhelyi BM, Kemenesi G, Tóth GE, Zana B, Somogyi B, Lanszki Z, Röst G, Jakab F, Papp B, Kintses B.
Journal/Proc./Book: Virus Evolution
Year: 2022
Thematic Pillar: Immuno Inflammatory Diseases, Metabolic and Cardiovascular Diseases

7. Proteome-wide landscape of solubility limits in a bacterial cell.

Györkei Á, Daruka L, Balogh D, Őszi E, Magyar Z, Szappanos B, Fekete G, Fuxreiter M, Horváth P, Pál C, Kintses B, Papp B.
Journal/Proc./Book: Scientific reports
Year: 2022
Thematic Pillar: Immuno-inflammatory Diseases, Metabolic and Cardiovascular Diseases

6. Suboptimal global transcriptional response increases the harmful effects of loss-of-function mutations

Károly Kovács, Zoltán Farkas, Djordje Bajić, Dorottya Kalapis, Andreea Daraba, Karola Almási, Bálint Kintses, Zoltán Bódi, Richard A Notebaart, Juan F Poyatos, Patrick Kemmeren, Frank C P Holstege, Csaba Pál, Balázs Papp
Journal/Proc./Book: Molecular Biology and Evolution
Year: 2020
Thematic Pillar: Immuno-inflammatory Diseases

5. Functional Anatomical Changes in Ulcerative Colitis Patients Determine Their Gut Microbiota Composition and Consequently the Possible Treatment Outcome

Anita Bálint, Klaudia Farkas, Orsolya Méhi, Bálint Kintses, Bálint Márk Vásárhelyi, Eszter Ari, Csaba Pál, Tamara Madácsy, József Maléth, Kata Judit Szántó, István Nagy, Mariann Rutka, Péter Bacsur, Diána Szűcs, Zoltán Szepes, Ferenc Nagy, Anna Fábián, Renáta Bor, Ágnes Milassin, Tamás Molnár
Journal/Proc./Book: Pharmaceuticals
Year: 2020
Thematic Pillar: Immuno-inflammatory Diseases

4. Rational design of balanced dual-targeting antibiotics with limited resistance

Akos Nyerges, Tihomir Tomašič, Martina Durcik, Tamas Revesz, Petra Szili, Gabor Draskovits, Ferenc Bogar, Žiga Skok, Nace Zidar, Janez Ilaš, Anamarija Zega, Danijel Kikelj, Lejla Daruka, Balint Kintses, Balint Vasarhelyi, Imre Foldesi, Diána Kata, Martin Welin, Raymond Kimbung, Dorota Focht, Lucija Peterlin Mašič, Csaba Pal
Journal/Proc./Book: PLOS Biology
Year: 2020
Thematic Pillar: Immuno-inflammatory Diseases

3. Rapid Evolution of Reduced Susceptibility against a Balanced Dual-Targeting Antibiotic through Stepping-Stone Mutations

Petra Szili, Gábor Draskovits, Tamás Révész, Ferenc Bogár, Dávid Balogh, Tamás Martinek, Lejla Daruka, Réka Spohn, Bálint Márk Vásárhelyi, Márton Czikkely, Bálint Kintses, Gábor Grézal, Györgyi Ferenc, Csaba Pál, Ákos Nyerges
Journal/Proc./Book: Antimicrobial Agents and Chemotherapy
Year: 2019
Thematic Pillar: Immuno-inflammatory Diseases

2. Chemical-genetic profiling reveals limited cross-resistance between antimicrobial peptides with different modes of action

Bálint Kintses, Pramod K. Jangir, Gergely Fekete, Mónika Számel, Orsolya Méhi, Réka Spohn, Lejla Daruka, Ana Martins, Ali Hosseinnia, Alla Gagarinova, Sunyoung Kim, Sadhna Phanse, Bálint Csörgő, Ádám Györkei, Eszter Ari, Viktória Lázár, István Nagy, Mohan Babu, Csaba Pál, Balázs Papp
Journal/Proc./Book: Nature Communications
Year: 2019
Thematic Pillar: Immuno-inflammatory Diseases

1. Integrated evolutionary analysis reveals antimicrobial peptides with limited resistance

Réka Spohn, Lejla Daruka, Viktória Lázár, Ana Martins, Fanni Vidovics, Gábor Grézal, Orsolya Méhi, Bálint Kintses, Mónika Számel, Pramod K. Jangir, Bálint Csörgő, Ádám Györkei, Zoltán Bódi, Anikó Faragó, László Bodai, Imre Földesi, Diána Kata, Gergely Maróti, Bernadett Pap, Roland Wirth, Balázs Papp, Csaba Pál
Journal/Proc./Book: Nature Communications
Year: 2019
Thematic Pillar: Immuno-inflammatory Diseases